{ "_id": "6a27d7a724555f66ed5465b8", "Package": "autocodebook", "Title": "Automatic Codebook and Tracking for 'Spark' and 'dplyr'\nPipelines", "Version": "0.1.0", "Authors@R": "person(\"Patricia Fortes C. de\", \"Macedo\",\nemail = \"macedopatriciafortes@gmail.com\",\nrole = c(\"aut\", \"cre\"))", "Description": "Wraps 'dplyr' verbs (mutate, summarise, filter) to\nautomatically capture variable metadata (type, source columns,\ncategories, and source code), producing a codebook and\neligibility tracking table with zero manual documentation.\nWorks with both 'sparklyr' (tbl_spark) and local data frames.\nAdds big-data optimizations (caching, assume-unique counting,\ncheckpointing) and a standardized report module with an\neligibility flowchart, editable codebook export (HTML, DOCX,\nXLSX), and cross-sectional or longitudinal variable inspection.", "License": "MIT + file LICENSE", "URL": "https://github.com/patriciafortesm/autocodebook", "BugReports": "https://github.com/patriciafortesm/autocodebook/issues", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "Config/roxygen2/version": "8.0.0", "Config/pak/sysreqs": "cmake make libuv1-dev libxml2-dev libssl-dev\nlibnode-dev", "Repository": "https://patriciafortesm.r-universe.dev", "Date/Publication": "2026-05-29 02:55:30 UTC", "RemoteUrl": "https://github.com/patriciafortesm/autocodebook", "RemoteRef": "HEAD", "RemoteSha": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-09 09:02:12 UTC", "User": "root" }, "Author": "Patricia Fortes C. de Macedo [aut, cre]", "Maintainer": "Patricia Fortes C. de Macedo ", "MD5sum": "e13cfa980cfcc0367c5546283041a84d", "_user": "patriciafortesm", "_type": "src", "_file": "autocodebook_0.1.0.tar.gz", "_fileid": "fb86317bd64c08d3fce39bbaecc7d66300961aafe9cff2d57c627d2f30fd0085", "_filesize": 531448, "_sha256": "fb86317bd64c08d3fce39bbaecc7d66300961aafe9cff2d57c627d2f30fd0085", "_created": "2026-06-09T09:02:12.000Z", "_published": "2026-06-09T09:06:47.130Z", "_distro": "noble", "_jobs": [ { "job": 80286071595, "time": 162, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7503202769" }, { "job": 80286071599, "time": 153, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7503199338" }, { "job": 80286071648, "time": 240, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7503218487" }, { "job": 80286071658, "time": 150, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7503188126" }, { "job": 80285346807, "time": 239, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7503141283" }, { "job": 80286071597, "time": 150, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7503198069" }, { "job": 80286071634, "time": 100, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7503178686" }, { "job": 80286071576, "time": 111, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7503182438" }, { "job": 80286071622, "time": 88, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7503174266" } ], "_buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/patriciafortesm/autocodebook", "_commit": { "id": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "author": "Patrícia Fortes C. de Macêdo <142368448+patriciafortesm@users.noreply.github.com>", "committer": "GitHub ", "message": "Add files via upload", "time": 1780023330 }, "_maintainer": { "name": "Patricia Fortes C. de Macedo", "email": "macedopatriciafortes@gmail.com", "login": "patriciafortesm", "linkedin": "in/patrícia-fortes-cavalcanti-de-macêdo", "description": "Postdoctoral researcher at CIDACS (Fiocruz), working with large-scale administrative data. Interested in data analysis, epidemiology, and public policy. ", "uuid": 142368448 }, "_registered": true, "_dependencies": [ { "package": "dplyr", "version": ">= 1.1.0", "role": "Imports" }, { "package": "rlang", "version": ">= 1.0.0", "role": "Imports" }, { "package": "tibble", "role": "Imports" }, { "package": "gt", "role": "Imports" }, { "package": "sparklyr", "role": "Suggests" }, { "package": "dbplyr", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "tidyplots", "role": "Suggests" }, { "package": "ggplot2", "role": "Suggests" }, { "package": "patchwork", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "officer", "role": "Suggests" }, { "package": "flextable", "role": "Suggests" }, { "package": "openxlsx", "role": "Suggests" }, { "package": "scales", "role": "Suggests" } ], "_owner": "patriciafortesm", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-16", "n": 14 }, { "week": "2026-22", "n": 13 } ], "_tags": [], "_stars": 1, "_contributors": [ { "user": "patriciafortesm", "count": 27, "uuid": 142368448 } ], "_userbio": { "uuid": 142368448, "type": "user", "name": "Patrícia Fortes C. de Macêdo", "description": "Postdoctoral researcher at CIDACS (Fiocruz), working with large-scale administrative data. Interested in data analysis, epidemiology, and public policy. " }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/autocodebook" }, "_devurl": "https://github.com/patriciafortesm/autocodebook", "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/autocodebook.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/patriciafortesm/autocodebook", "_realowner": "patriciafortesm", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2026-06-08" } ], "_exports": [ "auto_filter", "auto_mutate", "auto_summarise", "cb_checkpoint", "cb_export", "cb_get", "cb_init", "cb_register", "cb_render", "cb_reset", "cb_set_default_cache", "cb_set_verbose", "flow_get", "flow_reset", "flow_table", "generate_report", "track_export", "track_get", "track_outcomes", "track_render", "track_reset", "track_split", "track_step" ], "_help": [ { "page": "auto_filter", "title": "Filter with automatic tracking", "topics": [ "auto_filter" ] }, { "page": "auto_mutate", "title": "Mutate with automatic codebook registration", "topics": [ "auto_mutate" ] }, { "page": "auto_summarise", "title": "Summarise with automatic codebook registration", "topics": [ "auto_summarise" ] }, { "page": "cb_checkpoint", "title": "Checkpoint a Spark DataFrame", "topics": [ "cb_checkpoint" ] }, { "page": "cb_export", "title": "Export codebook to file", "topics": [ "cb_export" ] }, { "page": "cb_get", "title": "Get the current codebook as a tibble", "topics": [ "cb_get" ] }, { "page": "cb_init", "title": "Initialize autocodebook session", "topics": [ "cb_init" ] }, { "page": "cb_register", "title": "Manually register a variable in the codebook", "topics": [ "cb_register" ] }, { "page": "cb_render", "title": "Render the codebook as a gt table", "topics": [ "cb_render" ] }, { "page": "cb_reset", "title": "Reset the codebook (clear all entries)", "topics": [ "cb_reset" ] }, { "page": "cb_set_default_cache", "title": "Toggle default caching for big-data verbs", "topics": [ "cb_set_default_cache" ] }, { "page": "cb_set_verbose", "title": "Toggle verbose diagnostic messages", "topics": [ "cb_set_verbose" ] }, { "page": "flow_get", "title": "Get the current flow tree (raw structure)", "topics": [ "flow_get" ] }, { "page": "flow_reset", "title": "Reset the flow tree", "topics": [ "flow_reset" ] }, { "page": "flow_table", "title": "Flow tree as a tidy table", "topics": [ "flow_table" ] }, { "page": "generate_report", "title": "Generate a standardized report from the current session", "topics": [ "generate_report" ] }, { "page": "track_export", "title": "Export tracking table to file", "topics": [ "track_export" ] }, { "page": "track_get", "title": "Get the current tracking log as a tibble", "topics": [ "track_get" ] }, { "page": "track_outcomes", "title": "Attach outcome counts to the current leaves (CONSORT flowchart)", "topics": [ "track_outcomes" ] }, { "page": "track_render", "title": "Render the tracking log as a gt table", "topics": [ "track_render" ] }, { "page": "track_reset", "title": "Reset the tracking log", "topics": [ "track_reset" ] }, { "page": "track_split", "title": "Split the cohort into branches by a column (CONSORT flowchart)", "topics": [ "track_split" ] }, { "page": "track_step", "title": "Record a tracking step", "topics": [ "track_step" ] } ], "_readme": "https://github.com/patriciafortesm/autocodebook/raw/HEAD/README.md", "_rundeps": [ "base64enc", "bigD", "bitops", "bslib", "cachem", "cli", "commonmark", "curl", "digest", "dplyr", "evaluate", "farver", "fastmap", "fontawesome", "fs", "generics", "glue", "gt", "highr", "htmltools", "htmlwidgets", "jquerylib", "jsonlite", "juicyjuice", "knitr", "labeling", "lifecycle", "litedown", "magrittr", "markdown", "memoise", "mime", "pillar", "pkgconfig", "R6", "rappdirs", "RColorBrewer", "Rcpp", "reactable", "reactR", "rlang", "rmarkdown", "sass", "scales", "tibble", "tidyselect", "tinytex", "utf8", "V8", "vctrs", "viridisLite", "withr", "xfun", "xml2", "yaml" ], "_score": 3, "_indexed": true, "_nocasepkg": "autocodebook", "_universes": [ "patriciafortesm" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-06-09T09:04:53.000Z", "distro": "noble", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "4a941fe6c289889acd5e01a43ed78c5ed8da586963c707903ca75ef5963b0446", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" }, { "r": "4.6.0", "os": "linux", "version": "0.1.0", "date": "2026-06-09T09:04:45.000Z", "distro": "noble", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "1a3462e80533d7c913ddfeed6363274dfd6c814893a39d77dc41a3a7787c07d0", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-06-09T09:05:34.000Z", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "ce24ad5804f64878354b45cb1a83d1877cb23132de831b6ccd6ba24dcd2753fb", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" }, { "r": "4.6.0", "os": "mac", "version": "0.1.0", "date": "2026-06-09T09:04:18.000Z", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "1fa601bbb2a9a5a8aab17d48e1b05650b5c08d603a48193535d2e04511fa112a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-06-09T09:04:59.000Z", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "c24e3e5d47732911600b872344ccd3bca67f2bd5570a8872ec7c8999d7a83894", "status": "success", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-06-09T09:03:43.000Z", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "fd4acf7ddc6f2607eeee7053eaa22ed123da8798eb83e7c766d8244c08b95131", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-06-09T09:03:55.000Z", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "4a4a0d55cdcdf4ce11aa80d87cf94d9e5be5096d8d649a7298eb48a5cbbe2f0a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" }, { "r": "4.6.0", "os": "win", "version": "0.1.0", "date": "2026-06-09T09:03:33.000Z", "commit": "6ec9a7eb3768b34809a626a0fc0dc7835f83b841", "fileid": "f528825d80038daf8962b08e82724de704d9765706b68d4461b930062c0de47f", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/patriciafortesm/actions/runs/27195306014" } ] }